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Hierarchy For Package org.biojava.bio.search
Package Hierarchies:
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Class Hierarchy
class java.lang.Object
class org.biojava.utils.
AbstractChangeable
(implements org.biojava.utils.
Changeable
)
class org.biojava.bio.search.
SequenceDBSearchHit
(implements org.biojava.bio.
Annotatable
, org.biojava.bio.search.
SeqSimilaritySearchHit
)
class org.biojava.bio.search.
SequenceDBSearchResult
(implements org.biojava.bio.
Annotatable
, org.biojava.bio.search.
SeqSimilaritySearchResult
)
class org.biojava.bio.search.
SequenceDBSearchSubHit
(implements org.biojava.bio.search.
SeqSimilaritySearchSubHit
)
class org.biojava.bio.search.
SimpleSeqSimilaritySearchHit
(implements org.biojava.bio.search.
SeqSimilaritySearchHit
)
class org.biojava.bio.search.
SimpleSeqSimilaritySearchResult
(implements org.biojava.bio.search.
SeqSimilaritySearchResult
)
class org.biojava.bio.search.
SimpleSeqSimilaritySearchSubHit
(implements org.biojava.bio.search.
SeqSimilaritySearchSubHit
)
class org.biojava.bio.search.
KnuthMorrisPrattSearch
class org.biojava.bio.search.
SearchContentAdapter
(implements org.biojava.bio.search.
SearchContentHandler
)
class org.biojava.bio.search.
SearchContentFilter
(implements org.biojava.bio.search.
SearchContentHandler
)
class org.biojava.bio.search.
SeqSimilaritySearchHit.ByScoreComparator
(implements java.util.Comparator)
class org.biojava.bio.search.
SeqSimilaritySearchHit.BySubHitCountComparator
(implements java.util.Comparator)
class org.biojava.bio.search.
SeqSimilaritySearchSubHit.ByScoreComparator
(implements java.util.Comparator)
class org.biojava.bio.search.
SeqSimilaritySearchSubHit.BySubjectStartComparator
(implements java.util.Comparator)
Interface Hierarchy
interface org.biojava.utils.
Changeable
interface org.biojava.bio.
Annotatable
interface org.biojava.bio.search.
SeqSimilaritySearchHit
interface org.biojava.bio.search.
SeqSimilaritySearchResult
interface org.biojava.bio.search.
SeqSimilaritySearchSubHit
interface org.biojava.bio.search.
SearchContentHandler
interface org.biojava.bio.search.
SearchBuilder
interface org.biojava.bio.search.
SeqSimilaritySearcher
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