|
|||||||||||
PREV NEXT | FRAMES NO FRAMES |
Packages that use StatePath | |
org.biojava.bio.dp | HMM and Dynamic Programming Algorithms. |
org.biojava.bio.dp.onehead | |
org.biojava.bio.dp.twohead |
Uses of StatePath in org.biojava.bio.dp |
Classes in org.biojava.bio.dp that implement StatePath | |
class |
SimpleStatePath
A no-frills implementation of StatePath. |
Methods in org.biojava.bio.dp that return StatePath | |
abstract StatePath |
DP.viterbi(SymbolList[] symList,
ScoreType scoreType)
|
StatePath |
DP.generate(int length)
Generates an alignment from a model. |
Uses of StatePath in org.biojava.bio.dp.onehead |
Methods in org.biojava.bio.dp.onehead that return StatePath | |
StatePath |
SingleDP.viterbi(SymbolList[] symList,
ScoreType scoreType)
|
Uses of StatePath in org.biojava.bio.dp.twohead |
Methods in org.biojava.bio.dp.twohead that return StatePath | |
StatePath |
PairwiseDP.viterbi(SymbolList[] seqs,
ScoreType scoreType)
|
|
|||||||||||
PREV NEXT | FRAMES NO FRAMES |