org.biojava.bio.alignment
Class IllegalAlignmentEditException

java.lang.Object
  extended byjava.lang.Throwable
      extended byjava.lang.Exception
          extended byjava.lang.RuntimeException
              extended byorg.biojava.utils.NestedRuntimeException
                  extended byorg.biojava.bio.BioRuntimeException
                      extended byorg.biojava.bio.alignment.IllegalAlignmentEditException
All Implemented Interfaces:
java.io.Serializable

public class IllegalAlignmentEditException
extends BioRuntimeException

The usual reason for throwing an IllegalAlignmentEditException is that you are trying to shift a group of bases in such a way that it would require deleting bases. Only gaps can be deleted.

Author:
David Waring
See Also:
Serialized Form

Constructor Summary
IllegalAlignmentEditException()
          Just make the exception.
IllegalAlignmentEditException(java.lang.String message)
          Make the exception with a message.
IllegalAlignmentEditException(java.lang.Throwable t)
           
IllegalAlignmentEditException(java.lang.Throwable t, java.lang.String message)
           
 
Methods inherited from class org.biojava.utils.NestedRuntimeException
printStackTrace, printStackTrace, printStackTrace
 
Methods inherited from class java.lang.Throwable
fillInStackTrace, getCause, getLocalizedMessage, getMessage, getStackTrace, initCause, setStackTrace, toString
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

IllegalAlignmentEditException

public IllegalAlignmentEditException()
Just make the exception.


IllegalAlignmentEditException

public IllegalAlignmentEditException(java.lang.String message)
Make the exception with a message.


IllegalAlignmentEditException

public IllegalAlignmentEditException(java.lang.Throwable t)

IllegalAlignmentEditException

public IllegalAlignmentEditException(java.lang.Throwable t,
                                     java.lang.String message)