org.biojava.bio.dp.twohead
Interface CellCalculatorFactory
- All Known Implementing Classes:
- DPInterpreter
- public interface CellCalculatorFactory
- Author:
- Matthew Pocock
forwards
public CellCalculator forwards(ScoreType scoreType)
throws IllegalSymbolException,
IllegalAlphabetException,
IllegalTransitionException
- Throws:
IllegalSymbolException
IllegalAlphabetException
IllegalTransitionException
backwards
public CellCalculator backwards(ScoreType scoreType)
throws IllegalSymbolException,
IllegalAlphabetException,
IllegalTransitionException
- Throws:
IllegalSymbolException
IllegalAlphabetException
IllegalTransitionException
viterbi
public CellCalculator viterbi(ScoreType scoreType,
BackPointer terminal)
throws IllegalSymbolException,
IllegalAlphabetException,
IllegalTransitionException
- Throws:
IllegalSymbolException
IllegalAlphabetException
IllegalTransitionException