Serialized Form
wrapped
Annotation wrapped
changer
ChangeTable changer
properties
java.util.Map properties
wrapped
Annotation wrapped
mapper
TagMapper mapper
properties
java.util.Map properties
properties
java.util.Map properties
mergeSet
java.util.List mergeSet
parent
Annotation parent
overlay
java.util.Map overlay
properties
java.util.Map properties
- The properties map. This may be null if no property values have
yet been set.
properties
java.util.Map properties
Package org.biojava.bio.alignment |
Package org.biojava.bio.chromatogram |
Package org.biojava.bio.dist |
writeObject
private void writeObject(java.io.ObjectOutputStream stream)
throws java.io.IOException
- Governs serialization behaivour.
symbolIndices
java.util.Map symbolIndices
alphabet
Alphabet alphabet
firstA
Alphabet firstA
lastA
Alphabet lastA
nullModel
Distribution nullModel
writeReplace
private java.lang.Object writeReplace()
throws java.io.ObjectStreamException
serialVersionUID: 88622317l
alpha
Alphabet alpha
readObject
private void readObject(java.io.ObjectInputStream stream)
throws java.io.IOException,
java.lang.ClassNotFoundException
writeObject
private void writeObject(java.io.ObjectOutputStream stream)
throws java.io.IOException
symbolIndices
java.util.Map symbolIndices
alpha
FiniteAlphabet alpha
first
Distribution first
second
Distribution second
alphabet
Alphabet alphabet
nullModel
Distribution nullModel
serialVersionUID: 899744356l
readObject
private void readObject(java.io.ObjectInputStream stream)
throws java.io.IOException,
java.lang.ClassNotFoundException
nullModel
Distribution nullModel
alpha
FiniteAlphabet alpha
dis
Distribution dis
c
java.util.Map c
distToTrainer
java.util.Map distToTrainer
trainers
java.util.Set trainers
nullModelWeight
double nullModelWeight
other
Distribution other
delegate
Distribution delegate
table
ReversibleTranslationTable table
serialVersionUID: 88454038l
alphabet
FiniteAlphabet alphabet
nullModel
Distribution nullModel
Package org.biojava.bio.dp |
sym
SymbolList sym
index
int index
from
State from
to
State to
writeReplace
private java.lang.Object writeReplace()
throws java.io.ObjectStreamException
columns
int columns
- The number of columns in this model.
matchStates
EmissionState[] matchStates
- Match states array.
matchStates[0] == matchStates[columns+1] == magicalState().
insertStates
EmissionState[] insertStates
- Insert states array.
From 0 .. columns().
deleteStates
DotState[] deleteStates
- Delete states array.
From 0 .. columns()-1 corresponding to indexes 1..columns().
dis
Distribution dis
name
java.lang.String name
ann
Annotation ann
advance
int[] advance
matches
Alphabet matches
serialVersionUID: -3043028839927615753l
emissionAlpha
Alphabet emissionAlpha
stateAlpha
FiniteAlphabet stateAlpha
magicalState
MagicalState magicalState
transFrom
java.util.Map transFrom
transTo
java.util.Map transTo
transWeights
java.util.Map transWeights
_tran
Transition _tran
model
MarkovModel model
models
java.util.Set models
score
double score
delegate
Alignment delegate
columns
Distribution[] columns
alpha
Alphabet alpha
trainer
TransitionTrainer trainer
from
State from
to
State to
from
State from
to
State to
matrix
WeightMatrix matrix
threshold
double threshold
wm
WeightMatrix wm
stateAlpha
FiniteAlphabet stateAlpha
magicalState
MagicalState magicalState
states
EmissionState[] states
transFrom
java.util.Map transFrom
transTo
java.util.Map transTo
transWeights
java.util.Map transWeights
Package org.biojava.bio.dp.onehead |
emissionsProb
java.util.HashMap emissionsProb
emissionsOdds
java.util.HashMap emissionsOdds
emissionsNull
java.util.HashMap emissionsNull
states
State[] states
model
MarkovModel model
symList
SymbolList[] symList
scores
double[][] scores
score
double score
Package org.biojava.bio.dp.twohead |
states
State[] states
seqs
SymbolList[] seqs
scores
double[][][] scores
model
MarkovModel model
finalScore
double finalScore
emissionCache
java.util.HashMap emissionCache
ccFactory
CellCalculatorFactory ccFactory
Package org.biojava.bio.gui |
dist
Distribution dist
- The dist to render.
logoPainter
LogoPainter logoPainter
- The logoPainter property.
style
SymbolStyle style
- The style property.
scaleByInformation
boolean scaleByInformation
- The information/plain property
blockPainter
BlockPainter blockPainter
renderingHints
java.awt.RenderingHints renderingHints
root
java.lang.String root
seqs
java.util.ArrayList seqs
Package org.biojava.bio.gui.sequence |
beadDepth
double beadDepth
beadDisplacement
double beadDisplacement
beadOutline
java.awt.Paint beadOutline
beadFill
java.awt.Paint beadFill
beadStroke
java.awt.Stroke beadStroke
delegates
java.util.Map delegates
delegationCache
java.util.Map delegationCache
label
java.lang.Object label
leadingPixles
int leadingPixles
trailingPixles
int trailingPixles
contextCache
CacheMap contextCache
flushers
java.util.Set flushers
dimensionRatio
double dimensionRatio
filter
FeatureFilter filter
recurse
boolean recurse
contextCache
CacheMap contextCache
flushers
java.util.Set flushers
name
java.lang.String name
url
java.net.URL url
hotSpots
java.util.List hotSpots
type
java.lang.String type
url
java.net.URL url
coordinates
java.lang.Integer[] coordinates
userObject
java.lang.Object userObject
hotSpots
java.util.List hotSpots
renderers
java.util.List renderers
renderer
SequenceRenderer renderer
padding
double padding
line
java.awt.geom.Line2D.Float line
line
is the line to be drawn for each feature.
outline
java.awt.Paint outline
outline
is the line colour.
filter
FeatureFilter filter
filter
is the filter applied to both
FeatureHolder
s.
recurse
boolean recurse
recurse
indicates whether the filter should
recurse through any subfeatures.
subContextCache
CacheMap subContextCache
cacheFlushers
java.util.Set cacheFlushers
renderer
PairwiseSequenceRenderer renderer
renderers
java.util.List renderers
sequence
Sequence sequence
translation
int translation
direction
int direction
secSequence
Sequence secSequence
secTranslation
int secTranslation
secDirection
int secDirection
scale
double scale
renderer
PairwiseSequenceRenderer renderer
hints
java.awt.RenderingHints hints
leadingBorder
SequenceRenderContext.Border leadingBorder
trailingBorder
SequenceRenderContext.Border trailingBorder
propertyListener
java.beans.PropertyChangeListener propertyListener
repaintListener
ChangeListener repaintListener
layoutListener
ChangeListener layoutListener
svSupport
SequenceViewerSupport svSupport
mouseListener
java.awt.event.MouseListener mouseListener
svmSupport
SequenceViewerMotionSupport svmSupport
mouseMotionListener
java.awt.event.MouseMotionListener mouseMotionListener
rect
java.awt.geom.Rectangle2D rect
scaleHeight
boolean scaleHeight
renderer
RectangularBeadRenderer renderer
imageMap
ImageMap imageMap
urlFactory
URLFactory urlFactory
rect
java.awt.geom.RoundRectangle2D rect
arcWidth
double arcWidth
arcHeight
double arcHeight
sequence
Sequence sequence
range
RangeLocation range
direction
int direction
scale
double scale
pixelOffset
double pixelOffset
leadingBorder
SequenceRenderContext.Border leadingBorder
trailingBorder
SequenceRenderContext.Border trailingBorder
renderer
SequenceRenderer renderer
theMonitor
org.biojava.bio.gui.sequence.SequencePanel.RendererMonitor theMonitor
hints
java.awt.RenderingHints hints
svSupport
SequenceViewerSupport svSupport
mouseListener
java.awt.event.MouseListener mouseListener
svmSupport
SequenceViewerMotionSupport svmSupport
mouseMotionListener
java.awt.event.MouseMotionListener mouseMotionListener
layoutListener
ChangeListener layoutListener
repaintListener
ChangeListener repaintListener
pcs
java.beans.PropertyChangeSupport pcs
size
double size
alignment
int alignment
sequence
Sequence sequence
direction
int direction
scale
double scale
lines
int lines
spacer
int spacer
leadingBorder
SequenceRenderContext.Border leadingBorder
trailingBorder
SequenceRenderContext.Border trailingBorder
renderer
SequenceRenderer renderer
offsets
double[] offsets
realLines
int realLines
alongDim
double alongDim
acrossDim
double acrossDim
symbolsPerLine
int symbolsPerLine
theMonitor
org.biojava.bio.gui.sequence.SequencePoster.RendererMonitor theMonitor
renderingHints
java.awt.RenderingHints renderingHints
svSupport
SequenceViewerSupport svSupport
mouseListener
java.awt.event.MouseListener mouseListener
svmSupport
SequenceViewerMotionSupport svmSupport
mouseMotionListener
java.awt.event.MouseMotionListener mouseMotionListener
layoutListener
ChangeListener layoutListener
repaintListener
ChangeListener repaintListener
pcs
java.beans.PropertyChangeSupport pcs
size
double size
alignment
int alignment
size
double size
alignment
int alignment
renderer
SequenceRenderer renderer
path
java.util.List path
target
java.lang.Object target
mouseEvent
java.awt.event.MouseEvent mouseEvent
pos
int pos
pane
SixFrameRenderer pane
sequence
Sequence sequence
translation
int translation
direction
int direction
scale
double scale
renderer
SequenceRenderer renderer
rendererBorders
double rendererBorders
hints
java.awt.RenderingHints hints
leadingBorder
SequenceRenderContext.Border leadingBorder
trailingBorder
SequenceRenderContext.Border trailingBorder
propertyListener
java.beans.PropertyChangeListener propertyListener
repaintListener
ChangeListener repaintListener
layoutListener
ChangeListener layoutListener
svSupport
SequenceViewerSupport svSupport
mouseListener
java.awt.event.MouseListener mouseListener
svmSupport
SequenceViewerMotionSupport svmSupport
mouseMotionListener
java.awt.event.MouseMotionListener mouseMotionListener
outline
java.awt.Paint outline
fill
java.awt.Paint fill
blockDepth
double blockDepth
renderer
ZiggyFeatureRenderer renderer
imageMap
ImageMap imageMap
urlFactory
URLFactory urlFactory
Package org.biojava.bio.molbio |
name
java.lang.String name
site
SymbolList site
cutType
int cutType
dsCutPositions
int[] dsCutPositions
usCutPositions
int[] usCutPositions
forwardRegex
java.lang.String forwardRegex
reverseRegex
java.lang.String reverseRegex
summary
java.lang.String summary
enzyme
RestrictionEnzyme enzyme
enzyme
RestrictionEnzyme
field.
Package org.biojava.bio.program.gff |
Package org.biojava.bio.program.hmmer |
j
EmissionState j
c
EmissionState c
n
EmissionState n
hmmState
ModelInState hmmState
Package org.biojava.bio.program.phred |
lineWidth
int lineWidth
- The line width for output.
Package org.biojava.bio.proteomics |
readResolve
protected java.lang.Object readResolve()
throws java.io.ObjectStreamException
- Prevent duplication of the object during Serialization
- Throws:
java.io.ObjectStreamException
cleavageResidues
SymbolList cleavageResidues
notCleaveResidues
SymbolList notCleaveResidues
endoProtease
boolean endoProtease
name
java.lang.String name
Package org.biojava.bio.seq |
componentSequenceName
java.lang.String componentSequenceName
componentSequence
Sequence componentSequence
componentLocation
Location componentLocation
location
Location location
type
java.lang.String type
source
java.lang.String source
annotation
Annotation annotation
c1
FeatureFilter c1
c2
FeatureFilter c2
key
java.lang.Object key
value
java.lang.Object value
filter
FeatureFilter filter
key
java.lang.Object key
value
java.lang.Object value
type
AnnotationType type
filter
FeatureFilter filter
clazz
java.lang.Class clazz
cname
java.lang.String cname
filter
FeatureFilter filter
feature
Feature feature
minScore
double minScore
maxScore
double maxScore
score
double score
hashCode
int hashCode
filter
FeatureFilter filter
seqName
java.lang.String seqName
source
java.lang.String source
type
java.lang.String type
loc
Location loc
frame
FramedFeature.ReadingFrame frame
key
java.lang.Object key
child
FeatureFilter child
filter
FeatureFilter filter
filter
FeatureFilter filter
c1
FeatureFilter c1
c2
FeatureFilter c2
loc
Location loc
loc
Location loc
loc
Location loc
strand
StrandedFeature.Strand strand
text
java.lang.String text
frame
int frame
regions
java.util.List regions
resolver
RemoteFeature.Resolver resolver
templateToImpl
java.util.List templateToImpl
fallBack
FeatureRealizer fallBack
sequence
Sequence sequence
features
MergeFeatureHolder features
localFeatures
SimpleFeatureHolder localFeatures
projectedFeatures
FeatureHolder projectedFeatures
createOnUnderlying
boolean createOnUnderlying
writeReplace
private java.lang.Object writeReplace()
throws java.io.ObjectStreamException
text
java.lang.String text
value
int value
token
char token
strand
StrandedFeature.Strand strand
serialVersionUID: 9866447l
readObject
private void readObject(java.io.ObjectInputStream s)
throws java.io.IOException,
java.lang.ClassNotFoundException
seqDelegate
Sequence seqDelegate
- Delegate Sequence.
exposedFeatures
org.biojava.bio.seq.ViewSequence.ViewSeqMergeFeatureHolder exposedFeatures
- FeatureHolder support
addedFeatures
org.biojava.bio.seq.ViewSequence.ViewSeqSimpleFeatureHolder addedFeatures
name
java.lang.String name
- IDs
urn
java.lang.String urn
anno
Annotation anno
- Our annotation.
Package org.biojava.bio.seq.db |
parent
SequenceDB parent
annotator
SequenceAnnotator annotator
readObject
private void readObject(java.io.ObjectInputStream in)
throws java.io.IOException,
java.lang.ClassNotFoundException
sequenceByID
java.util.Map sequenceByID
- The sequence-by-id map.
idMaker
IDMaker idMaker
- An object to extract an ID for a sequence.
name
java.lang.String name
- The name of this sequence database.
writeReplace
private java.lang.Object writeReplace()
throws java.io.IOException
writeReplace
private java.lang.Object writeReplace()
throws java.io.IOException
idMaker
IDMaker idMaker
indexStore
IndexStore indexStore
parent
SequenceDB parent
ids
java.util.Set ids
readObject
private void readObject(java.io.ObjectInputStream in)
throws java.io.IOException,
java.lang.ClassNotFoundException
storeFile
java.io.File storeFile
indexFile
java.io.File indexFile
name
java.lang.String name
files
java.util.Set files
seqFileIndex
java.io.File[] seqFileIndex
format
SequenceFormat format
sbFactory
SequenceBuilderFactory sbFactory
symbolParser
SymbolTokenization symbolParser
Package org.biojava.bio.seq.homol |
homology
Homology homology
sibling
SimilarityPairFeature sibling
sibling
SimilarityPairFeature
field. May be null if the reciprocal
SimilarityPairFeature
has not yet been
created.
alignment
Alignment alignment
alignment
Alignment
field.
score
double score
score
of the search which produced the
alignment.
Package org.biojava.bio.seq.impl |
pfh
ProjectedFeatureHolder pfh
origSeq
Sequence origSeq
featureHolder
SimpleFeatureHolder featureHolder
- The FeatureHolder that we will delegate the FeatureHolder interface too.
This is lazily instantiated.
loc
Location loc
- The location of this feature.
type
java.lang.String type
- The type of this feature - something like Exon.
This is included for cheap interoperability with GFF.
source
java.lang.String source
- The source of this feature - the program that generated it.
This is included for cheap interoperability with GFF.
parent
FeatureHolder parent
- Our parent FeatureHolder.
annotation
Annotation annotation
- The annotation object.
This is lazily instantiated.
readingFrame
FramedFeature.ReadingFrame readingFrame
homology
Homology homology
regions
java.util.List regions
resolver
RemoteFeature.Resolver resolver
enzyme
RestrictionEnzyme enzyme
position
int position
readObject
private void readObject(java.io.ObjectInputStream s)
throws java.io.IOException,
java.lang.ClassNotFoundException
symList
SymbolList symList
- Delegate SymbolList.
urn
java.lang.String urn
name
java.lang.String name
annotation
Annotation annotation
featureHolder
org.biojava.bio.seq.impl.SimpleSequence.SimpleSequenceFeatureHolder featureHolder
realizer
FeatureRealizer realizer
sibling
SimilarityPairFeature sibling
alignment
Alignment alignment
score
double score
strand
StrandedFeature.Strand strand
Package org.biojava.bio.seq.io |
alphabet
Alphabet alphabet
symbolsToCharacters
java.util.Map symbolsToCharacters
charactersToSymbols
java.util.Map charactersToSymbols
caseSensitive
boolean caseSensitive
subTokenizations
java.util.List subTokenizations
elideSymbols
boolean elideSymbols
mListeners
java.util.Vector mListeners
delegateFactory
SequenceBuilderFactory delegateFactory
delegateFactory
SequenceBuilderFactory delegateFactory
mListeners
java.util.Vector mListeners
lineWidth
int lineWidth
- The line width for output.
mListeners
java.util.Vector mListeners
elideSymbols
boolean elideSymbols
delegateFactory
SequenceBuilderFactory delegateFactory
caseSensitive
boolean caseSensitive
delegateFactory
SequenceBuilderFactory delegateFactory
sciNameKey
java.lang.String sciNameKey
commonNameKey
java.lang.String commonNameKey
ncbiTaxonKey
java.lang.String ncbiTaxonKey
taxonFactory
TaxonFactory taxonFactory
taxonParser
TaxonParser taxonParser
delegateFactory
SequenceBuilderFactory delegateFactory
delegateFactory
SequenceBuilderFactory delegateFactory
alphabet
Alphabet alphabet
Package org.biojava.bio.symbol |
readResolve
protected java.lang.Object readResolve()
throws java.io.ObjectStreamException
- To prevent duplication of a what should be a
single instance of an existing alphabet. This method
was written as protected so that subclasses even from
other packages will inherit it. It should only be overridden
with care.
tokenizationsByName
java.util.Map tokenizationsByName
ambCache
java.util.Map ambCache
syms
Symbol[] syms
placeHolder
byte placeHolder
writeReplace
private java.lang.Object writeReplace()
throws java.io.ObjectStreamException
alphabets
java.util.List alphabets
doubleToSym
WeakValueHashMap doubleToSym
minVal
double minVal
maxVal
double maxVal
matches
Alphabet matches
val
double val
matches
Alphabet matches
readResolve
protected java.lang.Object readResolve()
throws java.io.ObjectStreamException
- To prevent duplication of a what should be a
single instance of an existing alphabet. This method
was written as protected so that subclasses even from
other packages will inherit it. It should only be overridden
with care.
min
double min
max
double max
name
java.lang.String name
sym
Symbol sym
alpha
FiniteAlphabet alpha
length
int length
pos
int pos
length
int length
replacement
SymbolList replacement
name
java.lang.String name
annotation
Annotation annotation
outerMin
int outerMin
innerMin
int innerMin
innerMax
int innerMax
outerMax
int outerMax
mIsMinFuzzy
boolean mIsMinFuzzy
mIsMaxFuzzy
boolean mIsMaxFuzzy
resolver
FuzzyLocation.RangeResolver resolver
min
int min
max
int max
resolver
FuzzyPointLocation.PointResolver resolver
sym
Symbol sym
writeReplace
private java.lang.Object writeReplace()
throws java.io.ObjectStreamException
intToSym
WeakValueHashMap intToSym
- Canonicalization map for ints and references to symbols.
val
int val
matches
Alphabet matches
min
int min
max
int max
name
java.lang.String name
componentLocations
java.util.List componentLocations
length
int length
log2PackedSymsPerStorageUnit
int log2PackedSymsPerStorageUnit
packedSymsPerStorageUnit
int packedSymsPerStorageUnit
storageUnitOffsetMask
int storageUnitOffsetMask
storageUnitSize
int storageUnitSize
packedSymbolArray
byte[] packedSymbolArray
log2SymsPerCacheLine
int log2SymsPerCacheLine
cacheLineOffsetMask
int cacheLineOffsetMask
symbolCache
Symbol[] symbolCache
currCacheIndex
int currCacheIndex
cacheLineCount
int cacheLineCount
symsInFinalStorageUnit
int symsInFinalStorageUnit
symsInFinalCacheLine
int symsInFinalCacheLine
fullStorageUnitsInFinalCacheLine
int fullStorageUnitsInFinalCacheLine
log2StorageUnitsPerCacheLine
int log2StorageUnitsPerCacheLine
storageUnitsPerCacheLine
int storageUnitsPerCacheLine
bitsPerElement
byte bitsPerElement
- See Also:
- Constant Field Values
packing
Packing packing
syms
long[] syms
length
int length
symsPerElement
byte symsPerElement
mask
byte mask
currentMin
int currentMin
currentMax
int currentMax
currentWord
long currentWord
wordsize
int wordsize
point
int point
- The actual index contained.
min
int min
- The minimum point contained.
max
int max
- The maximum point contained.
labelToSymbolList
java.util.Map labelToSymbolList
labels
java.util.List labels
alphabet
Alphabet alphabet
length
int length
serialVersionUID: 216254146l
name
java.lang.String name
annotation
Annotation annotation
symbols
java.util.Set symbols
ambig
java.util.Set ambig
alphabets
java.util.List alphabets
- A list of alphabets that make up this one - a singleton list containing
this.
alpha
Alphabet alpha
- The Alphabet - the same as source but guaranteed to include the gap character.
source
SymbolList source
- The SymbolList to view.
blocks
java.util.ArrayList blocks
- The list of ungapped blocks that align between source and this view.
length
int length
- The total length of the alignment - necessary to allow leading & trailing gaps.
sourceStart
int sourceStart
sourceEnd
int sourceEnd
viewStart
int viewStart
viewEnd
int viewEnd
revMap
java.util.Map revMap
- Map from targets to source symbols
alphabet
Alphabet alphabet
symbols
Symbol[] symbols
length
int length
isView
boolean isView
viewOffset
int viewOffset
referenceSymbolList
SymbolList referenceSymbolList
transMap
java.util.Map transMap
source
FiniteAlphabet source
target
Alphabet target
sym
AtomicSymbol sym
alphabets
java.util.List alphabets
alphabet
FiniteAlphabet alphabet
root
SuffixTree.SuffixNode root
indexer
AlphabetIndex indexer
counts
java.util.List counts
writeReplace
private java.lang.Object writeReplace()
throws java.io.ObjectStreamException
Package org.biojava.bio.taxa |
Package org.biojava.directory |
Package org.biojava.stats.svm |
posClass
java.util.Set posClass
negClass
java.util.Set negClass
lambda
double lambda
- The scale vactor.
nested
SVMKernel nested
- The SVMKernel being wrapped.
order
double order
a
double a
c
double c
width
double width
size
int size
keys
int[] keys
values
double[] values
s
SparseVector s
- The sparse vector that performes the normalization.
Package org.biojava.stats.svm.tools |
target
SVMTarget target
model
SVMClassifierModel model
addPos
boolean addPos
posShape
java.awt.Shape posShape
negShape
java.awt.Shape negShape
svPaint
java.awt.Paint svPaint
plainPaint
java.awt.Paint plainPaint
posPaint
java.awt.Paint posPaint
negPaint
java.awt.Paint negPaint
kernel
SVMKernel kernel
depthScaler
SuffixTreeKernel.DepthScaler depthScaler
- The DepthScaler that will scale each sub-space.
This defaults to UniformScaler.
a
SuffixTreeKernel.DepthScaler a
b
SuffixTreeKernel.DepthScaler b
bSet
java.util.BitSet bSet
Package org.biojava.utils |
type
ChangeType type
change
java.lang.Object change
previous
java.lang.Object previous
chain
ChangeEvent chain
writeReplace
private java.lang.Object writeReplace()
- Make a placeholder for this object in a serialized stream.
name
java.lang.String name
ourField
java.lang.reflect.Field ourField
superType
ChangeType superType
change
ChangeEvent change
a
java.lang.Object a
b
java.lang.Object b
a
java.lang.Object a
b
java.lang.Object b
c
java.lang.Object c
subException
java.lang.Throwable subException
- The wrapped Throwable object
subThrowable
java.lang.Throwable subThrowable
subThrowable
java.lang.Throwable subThrowable
mMessage
java.lang.String mMessage
locator
java.lang.String locator
lineNumber
int lineNumber
character
int character
line
java.lang.String line
obj
java.lang.Object obj
mappings
java.lang.Object[] mappings
numMappings
int numMappings
readResolve
public java.lang.Object readResolve()
throws java.io.ObjectStreamException
className
java.lang.String className
fieldName
java.lang.String fieldName
Package org.biojava.utils.lsid |
serialVersionUID: 8478038493421763123l
authorityId
java.lang.String authorityId
namespaceId
java.lang.String namespaceId
objectId
java.lang.String objectId
revisionId
java.lang.String revisionId
Package org.biojava.utils.xml |