Package org.biojava.bio.gui

Graphical interfaces for biojava objects.

See:
          Description

Interface Summary
LogoPainter The interface for something that will draw the sequence logo for a state.
SymbolStyle The interface for things that say how to paint a symbol.
 

Class Summary
BarLogoPainter A logo painter that paints in bars.
DistributionLogo The gui component for rendering a DistributionLogo.
DNAStyle A simple implementation of SymbolStyle optimized for DNA.
PlainStyle A simple implementation of SymbolStyle that just uses a single paint for outlines and a single paint for filling.
SequencePanel A panel that visualy displays a Sequence.
SimpleSymbolStyle A no-frills implementation of SymbolStyle.
TextLogoPainter A logo painter that paints in stacked letters.
 

Package org.biojava.bio.gui Description

Graphical interfaces for biojava objects.

Where ever possible we have used java bean like interfaces. The model view paradigm is used, and in most cases the org.biojava.bio.seq and org.biojava.bio.alignment interfaces form the basis of the model. Often the actual rendering of the component is abstracted off so that the same class can render data in different ways by swapping in an apropreate renderer. This maintains consistant API even when the user sees very different images.