EMBOSS: PATTERN MATCHING


Program nameDescription
dreg regular expression search of a nucleotide sequence
fuzznuc Nucleic acid pattern search
fuzzpro Protein pattern search
fuzztran Protein pattern search after translation
patmatdb Search a protein sequence with a motif
patmatmotifs Search a PROSITE motif database with a protein sequence
preg regular expression search of a protein sequence
pscan Scans proteins using PRINTS
tfscan Scans DNA sequences for transcription factors