EMBOSS: SEQUENCE COMPARISON


Program nameDescription
dotmatcher Displays a thresholded dotplot of two sequences
polydot Displays all-against-all dotplots of a set of sequences
seqmatchall Does an all-against-all comparison of a set of sequences
stssearch Searches a DNA database for matches with a set of STS primers
supermatcher Finds a match of a large sequence against one or more sequences
wordmatch Finds all exact matches of a given size between 2 sequences