Package org.biojava.bio.search

Interface Summary
SeqSimilaritySearcher objects of this type represent one particular installation (not just implementation) of a sequence similarity searcher such as BLASTP.
SeqSimilaritySearchHit objects of this type represent one particular hit (i.e.
SeqSimilaritySearchResult objects of this type represent one particular result of a sequence similarity search.
SeqSimilaritySearchSubHit objects of this type represent one particular sub-hit (i.e.
 

Class Summary
SimpleSeqSimilaritySearchHit a simple implementation of interface SeqSimilaritySearchHit that takes care of all the housekeeping.
SimpleSeqSimilaritySearchResult an class that implements the trivial (housekeeping) responsibilities of interface SeqSimilaritySearchResult.
SimpleSeqSimilaritySearchSubHit a simple implementation of interface SeqSimilaritySearchSubHit that takes care of all the house-keeping.