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A single symbol.
This is the atomic unit of a SymbolList, or a sequence. It allows for fine-train fly-weighting, so that there can be one instance of each symbol that is referenced multiple times.
Method Summary | |
Alphabet |
getMatches()
The alphabet containing the symbols matched by this ambiguity symbol. |
java.lang.String |
getName()
The long name for the symbol. |
char |
getToken()
The token for the symbol. |
Methods inherited from interface org.biojava.bio.Annotatable |
getAnnotation |
Method Detail |
public char getToken()
public java.lang.String getName()
public Alphabet getMatches()
This alphabet contains all of, and only, the symbols matched by this symbol. For example, the symbol representing the DNA ambiguity code for W would contain the symbol for A and T from the DNA alphabet.
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