org.Biocorba.Seqcore
Interface _Seq_Operations

All Known Implementing Classes:
SeqImpl

public interface _Seq_Operations
extends _PrimarySeq_Operations


Method Summary
 SeqFeatureIterator all_features_iterator(org.omg.CORBA.portable.ObjectImpl seq)
           
 SeqFeature[] all_features(org.omg.CORBA.portable.ObjectImpl seq)
           
 SeqFeatureIterator features_region_iterator(org.omg.CORBA.portable.ObjectImpl seq, int start, int end)
           
 SeqFeature[] features_region(org.omg.CORBA.portable.ObjectImpl seq, int start, int end)
           
 PrimarySeq get_PrimarySeq(org.omg.CORBA.portable.ObjectImpl seq)
           
 int max_feature_request(org.omg.CORBA.portable.ObjectImpl seq)
           
 
Methods inherited from interface org.Biocorba.Seqcore._PrimarySeq_Operations
accession_number, display_id, primary_id, version
 
Methods inherited from interface org.Biocorba.Seqcore._AnonymousSeq_Operations
get_seq, get_subseq, length, max_request_length, type
 
Methods inherited from interface GNOME._Unknown_Operations
query_interface, ref, unref
 

Method Detail

all_features

public SeqFeature[] all_features(org.omg.CORBA.portable.ObjectImpl seq)
                          throws RequestTooLarge

all_features_iterator

public SeqFeatureIterator all_features_iterator(org.omg.CORBA.portable.ObjectImpl seq)

features_region

public SeqFeature[] features_region(org.omg.CORBA.portable.ObjectImpl seq,
                                    int start,
                                    int end)
                             throws OutOfRange,
                                    UnableToProcess,
                                    RequestTooLarge

features_region_iterator

public SeqFeatureIterator features_region_iterator(org.omg.CORBA.portable.ObjectImpl seq,
                                                   int start,
                                                   int end)
                                            throws OutOfRange,
                                                   UnableToProcess

max_feature_request

public int max_feature_request(org.omg.CORBA.portable.ObjectImpl seq)

get_PrimarySeq

public PrimarySeq get_PrimarySeq(org.omg.CORBA.portable.ObjectImpl seq)