EMBOSS: UTILS DATABASE CREATION


Program nameDescription
cutgextract Extract data from CUTG
domainer Build domain coordinate files
nrscope Converts redundant EMBL-format SCOP file to non-redundant one
pdbtosp Convert raw swissprot:pdb equivalence file to embl-like format
printsextract Extract data from PRINTS
prosextract Builds the PROSITE motif database for patmatmotifs to search
rebaseextract Extract data from REBASE
scope Convert raw scop classification file to embl-like format
scopparse Reads raw scop classifications file and writes embl-like format scop classification file
seqnr Converts redundant database results to a non-redundant set of hits
tfextract Extract data from TRANSFAC