Uses of Interface
org.biojava.bio.seq.SequenceAnnotator

Packages that use SequenceAnnotator
org.biojava.bio.dp HMM and Dynamic Programming Algorithms. 
org.biojava.bio.molbio The classes and interfaces in this package cover common molecular biological techniques such as restriction digests and PCR. 
org.biojava.bio.program.gff GFF manipulation. 
org.biojava.bio.seq.db Collections of biological sequence data. 
 

Uses of SequenceAnnotator in org.biojava.bio.dp
 

Classes in org.biojava.bio.dp that implement SequenceAnnotator
 class WeightMatrixAnnotator
          Annotates a sequence with hits to a weight-matrix.
 

Uses of SequenceAnnotator in org.biojava.bio.molbio
 

Classes in org.biojava.bio.molbio that implement SequenceAnnotator
 class RestrictionMapper
          RestrictionMapper is a class for annotating Sequences with Features which represent restriction sites.
 

Uses of SequenceAnnotator in org.biojava.bio.program.gff
 

Methods in org.biojava.bio.program.gff that return SequenceAnnotator
 SequenceAnnotator GFFEntrySet.getAnnotator()
          Get an annotator that can add GFF features to a Sequence using the features in this GFFEntrySet.
 SequenceAnnotator GFFEntrySet.getAnnotator(boolean checkSeqName)
          Get an annotator that can add GFF features to a Sequence using the features in this GFFEntrySet.
 

Uses of SequenceAnnotator in org.biojava.bio.seq.db
 

Constructors in org.biojava.bio.seq.db with parameters of type SequenceAnnotator
AnnotatedSequenceDB(SequenceDB parent, SequenceAnnotator a)