ssaha
Class ResultPrinter
java.lang.Object
ssaha.ResultPrinter
- All Implemented Interfaces:
- org.biojava.bio.program.ssaha.SearchListener
public class ResultPrinter
- extends Object
- implements org.biojava.bio.program.ssaha.SearchListener
Nested classes/interfaces inherited from interface org.biojava.bio.program.ssaha.SearchListener |
org.biojava.bio.program.ssaha.SearchListener.Echo, org.biojava.bio.program.ssaha.SearchListener.FilterByLength, org.biojava.bio.program.ssaha.SearchListener.Tee, org.biojava.bio.program.ssaha.SearchListener.Wrapper |
Constructor Summary |
ResultPrinter(org.biojava.bio.program.ssaha.DataStore dataStore)
|
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
ResultPrinter
public ResultPrinter(org.biojava.bio.program.ssaha.DataStore dataStore)
startSearch
public void startSearch(String seqID)
- Specified by:
startSearch
in interface org.biojava.bio.program.ssaha.SearchListener
endSearch
public void endSearch(String seqID)
- Specified by:
endSearch
in interface org.biojava.bio.program.ssaha.SearchListener
hit
public void hit(int hitID,
int queryOffset,
int hitOffset,
int hitLength)
- Specified by:
hit
in interface org.biojava.bio.program.ssaha.SearchListener