Overview
Package
Class
Use
Tree
Deprecated
Index
Help
PREV LETTER
NEXT LETTER
FRAMES
NO FRAMES
All Classes
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
F
FileBrowser
- class pipe.gui.widgets.
FileBrowser
.
FileBrowser()
- Constructor for class pipe.gui.widgets.
FileBrowser
FileBrowser(String)
- Constructor for class pipe.gui.widgets.
FileBrowser
FileBrowser(String, String, String)
- Constructor for class pipe.gui.widgets.
FileBrowser
FindMarkup(myNode)
- Method in class pipe.dataLayer.calculations.
myNode
findNetInvariants(int[])
- Method in class pipe.modules.invariantAnalysis.
InvariantAnalysis
Find the net invariants.
findNonMinimal()
- Method in class pipe.dataLayer.
PNMatrix
Find a column with non-minimal support.
findPEquations(int[])
- Method in class pipe.modules.invariantAnalysis.
InvariantAnalysis
Find the P equations of the net.
findRemainingNZCoef(int)
- Method in class pipe.dataLayer.
PNMatrix
Find the coefficients corresponding to column indices of all but the first non zero elements of row h.
findRemainingNZIndices(int)
- Method in class pipe.dataLayer.
PNMatrix
Find the column indices of all but the first non zero elements of row h.
findVectors(PNMatrix)
- Method in class pipe.modules.invariantAnalysis.
InvariantAnalysis
Transform a matrix to obtain the minimal generating set of vectors.
finished()
- Method in class pipe.modules.dnamaca.
SwingWorker
Called on the event dispatching thread (not on the worker thread) after the
construct
method has returned.
FIRE
- Static variable in interface pipe.gui.
Constants
fire(int)
- Method in class pipe.dataLayer.calculations.
myNode
fireRandomTransition()
- Method in class pipe.dataLayer.
DataLayer
Fire a random transition, takes rate (probability) of Transitions into account
fireRandomTransitionBackwards()
- Method in class pipe.dataLayer.
DataLayer
fireTransition(Transition)
- Method in class pipe.gui.
Animator
fireTransition(Transition)
- Method in class pipe.dataLayer.
DataLayer
Fire a specified transition, no affect if transtions not enabled
fireTransitionBackwards(Transition)
- Method in class pipe.dataLayer.
DataLayer
firstNonZeroElementIndex(int)
- Method in class pipe.dataLayer.
PNMatrix
Find the column index of the first non zero element of row h.
firstNonZeroRowIndex()
- Method in class pipe.dataLayer.
PNMatrix
Find the first non-zero row of a matrix.
Found_An_Omega
- Variable in class pipe.dataLayer.calculations.
myTree
fSeq
- Variable in class pipe.gui.
AnimationHistory
Holds all the transitions in the sequence
Overview
Package
Class
Use
Tree
Deprecated
Index
Help
PREV LETTER
NEXT LETTER
FRAMES
NO FRAMES
All Classes
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V