Program name | Description |
chaos |
Create a chaos game representation plot for a sequence
|
chips |
Codon usage statistics
|
codcmp |
Codon usage table comparison
|
compseq |
Counts the composition of dimer/trimer/etc words in a sequence
|
cusp |
Create a codon usage table
|
freak |
Residue/base frequency table or plot
|
geecee |
Calculates the fractional GC content of nucleic acid sequences
|
isochore |
Plots isochores in large DNA sequences
|
newcpgreport |
Report CpG rich areas
|
newcpgseek |
Reports CpG rich regions
|
wobble |
Wobble base plot
|
wordcount |
Counts words of a specified size in a DNA sequence
|