org.biojava.bio.seq.db.biosql
Class BioSQLSequenceDBProvider

java.lang.Object
  extended by org.biojava.bio.seq.db.biosql.BioSQLSequenceDBProvider
All Implemented Interfaces:
SequenceDBProvider

Deprecated. Use hibernate and org.biojavax.bio.db.*

public class BioSQLSequenceDBProvider
extends Object
implements SequenceDBProvider

Author:
Thomas Down

Constructor Summary
BioSQLSequenceDBProvider()
          Deprecated.  
 
Method Summary
 String getName()
          Deprecated. The name of this provider.
 SequenceDBLite getSequenceDB(Map config)
          Deprecated. Get a sequence database.
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

BioSQLSequenceDBProvider

public BioSQLSequenceDBProvider()
Deprecated. 
Method Detail

getName

public String getName()
Deprecated. 
Description copied from interface: SequenceDBProvider
The name of this provider.

Specified by:
getName in interface SequenceDBProvider
Returns:
the provider's name.

getSequenceDB

public SequenceDBLite getSequenceDB(Map config)
                             throws RegistryException,
                                    BioException
Deprecated. 
Description copied from interface: SequenceDBProvider
Get a sequence database.

Specified by:
getSequenceDB in interface SequenceDBProvider
Parameters:
config - a Map containing key-value pairs identifying the database to resolve.
Returns:
a SequenceDBLite that was resolved.
Throws:
RegistryException
BioException