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java.lang.Object | +--org.biojava.bio.dp.WeightMatrixAnnotator
Annotates a sequence with hits to a weight-matrix.
This SequenceAnnotator implementation returns a new ViewSequence wrapping the underlying Sequence
Constructor Summary | |
WeightMatrixAnnotator(WeightMatrix wm,
double threshold)
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Method Summary | |
Sequence |
annotate(Sequence seq)
Return an annotated version of a sequence. |
Methods inherited from class java.lang.Object |
clone,
equals,
finalize,
getClass,
hashCode,
notify,
notifyAll,
toString,
wait,
wait,
wait |
Constructor Detail |
public WeightMatrixAnnotator(WeightMatrix wm, double threshold)
Method Detail |
public Sequence annotate(Sequence seq) throws IllegalAlphabetException, BioException
seq
- The sequence to be annotated.
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