game
Class SeqIOTatler

java.lang.Object
  extended by org.biojava.bio.seq.io.SeqIOAdapter
      extended by game.SeqIOTatler
All Implemented Interfaces:
org.biojava.bio.seq.io.SeqIOListener

public class SeqIOTatler
extends org.biojava.bio.seq.io.SeqIOAdapter

dumps events being passed to the class


Constructor Summary
SeqIOTatler()
           
 
Method Summary
 void addFeatureProperty(Object key, Object value)
           
 void addSequenceProperty(Object key, Object value)
           
 void addSymbols(org.biojava.bio.symbol.Alphabet alpha, org.biojava.bio.symbol.Symbol[] syms, int start, int length)
           
 void endFeature()
           
 void endSequence()
           
 void setName(String name)
           
 void startFeature(org.biojava.bio.seq.Feature.Template feature)
           
 void startSequence()
           
 
Methods inherited from class org.biojava.bio.seq.io.SeqIOAdapter
setURI
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

SeqIOTatler

public SeqIOTatler()
Method Detail

addFeatureProperty

public void addFeatureProperty(Object key,
                               Object value)
Specified by:
addFeatureProperty in interface org.biojava.bio.seq.io.SeqIOListener
Overrides:
addFeatureProperty in class org.biojava.bio.seq.io.SeqIOAdapter

addSequenceProperty

public void addSequenceProperty(Object key,
                                Object value)
Specified by:
addSequenceProperty in interface org.biojava.bio.seq.io.SeqIOListener
Overrides:
addSequenceProperty in class org.biojava.bio.seq.io.SeqIOAdapter

endFeature

public void endFeature()
Specified by:
endFeature in interface org.biojava.bio.seq.io.SeqIOListener
Overrides:
endFeature in class org.biojava.bio.seq.io.SeqIOAdapter

endSequence

public void endSequence()
Specified by:
endSequence in interface org.biojava.bio.seq.io.SeqIOListener
Overrides:
endSequence in class org.biojava.bio.seq.io.SeqIOAdapter

setName

public void setName(String name)
Specified by:
setName in interface org.biojava.bio.seq.io.SeqIOListener
Overrides:
setName in class org.biojava.bio.seq.io.SeqIOAdapter

startFeature

public void startFeature(org.biojava.bio.seq.Feature.Template feature)
Specified by:
startFeature in interface org.biojava.bio.seq.io.SeqIOListener
Overrides:
startFeature in class org.biojava.bio.seq.io.SeqIOAdapter

startSequence

public void startSequence()
Specified by:
startSequence in interface org.biojava.bio.seq.io.SeqIOListener
Overrides:
startSequence in class org.biojava.bio.seq.io.SeqIOAdapter

addSymbols

public void addSymbols(org.biojava.bio.symbol.Alphabet alpha,
                       org.biojava.bio.symbol.Symbol[] syms,
                       int start,
                       int length)
Specified by:
addSymbols in interface org.biojava.bio.seq.io.SeqIOListener
Overrides:
addSymbols in class org.biojava.bio.seq.io.SeqIOAdapter