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public interface SequenceAnnotator
An object which adds some additional information to a Sequence.
There are two approaches which can be taken to adding features to a sequence:
Method Summary | |
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Sequence |
annotate(Sequence seq)
Return an annotated version of a sequence. |
Method Detail |
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Sequence annotate(Sequence seq) throws BioException, IllegalAlphabetException, ChangeVetoException
seq
- The sequence to be annotated.
seq
(may be the
same object).
IllegalAlphabetException
- If the sequence is over
an inappropriate alphabet for
the annotated method being
encapsulated
BioException
- if the sequence fails to be annotated
ChangeVetoException
- if either the sequence doesn't allow
annotation or if the change was vetoed
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