org.biojava.bio.seq.impl
Class SimpleRemoteFeature.DBResolver
java.lang.Object
org.biojava.bio.seq.impl.SimpleRemoteFeature.DBResolver
- All Implemented Interfaces:
- RemoteFeature.Resolver
- Enclosing class:
- SimpleRemoteFeature
public static class SimpleRemoteFeature.DBResolver
- extends Object
- implements RemoteFeature.Resolver
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
SimpleRemoteFeature.DBResolver
public SimpleRemoteFeature.DBResolver(SequenceDB seqDB)
getSeqDB
public SequenceDB getSeqDB()
resolve
public Feature resolve(RemoteFeature rFeat)
throws BioException
- Description copied from interface:
RemoteFeature.Resolver
- Resolve rFeat.
This method returns a Feature that represents the RemoteFeature rFeat on
some Sequence where all of the Regions can be represented localy. This
may be an assembly of the parent sequence of rFeat and each of the
Sequences that have IDs listed in the Region list of rFeat.
- Specified by:
resolve
in interface RemoteFeature.Resolver
- Parameters:
rFeat
- the RemoteFeature to resolve
- Returns:
- a Feature on some other Seqence where each Region of rFeat is
resolved into a local Location
- Throws:
BioException