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Packages that use TranslationTable | |
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org.biojava.bio.symbol | Representation of the Symbols that make up a sequence, and locations within them. |
Uses of TranslationTable in org.biojava.bio.symbol |
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Subinterfaces of TranslationTable in org.biojava.bio.symbol | |
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interface |
ManyToOneTranslationTable
A translation table that will handle the many-to-one mappings that you see, for example, with genetic codes. |
interface |
ReversibleTranslationTable
A translation table that can also translate from the target to source alphabet. |
Classes in org.biojava.bio.symbol that implement TranslationTable | |
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class |
AbstractManyToOneTranslationTable
an abstract class implementing basic functionality of a translation table that translates Symbols from one Alphabet to another. |
class |
AbstractReversibleTranslationTable
an abstract class implementing basic functionality of a translation table that translates Symbols from one Alphabet to another. |
class |
SimpleGeneticCodeTable
A genetic code translation table representing a translation table in the DDBJ/EMBL/GenBank Feature Table (appendix V). |
class |
SimpleManyToOneTranslationTable
A no-frills implementation of a translation table that maps between two alphabets. |
class |
SimpleReversibleTranslationTable
A no-frills implementation of TranslationTable that uses a Map to map from symbols in a finite source alphabet into a target alphabet. |
class |
SimpleTranslationTable
A no-frills implementation of TranslationTable that uses a Map to map from symbols in a finite source alphabet into a target alphabet. |
Methods in org.biojava.bio.symbol with parameters of type TranslationTable | |
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static SymbolList |
SymbolListViews.translate(SymbolList symbols,
TranslationTable table)
Provides a 'translated' view of an underlying SymbolList. |
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