org.biojava.bio.program.ssaha
Class SequenceStreamer.FileStreamer

java.lang.Object
  extended by org.biojava.bio.program.ssaha.SequenceStreamer.FileStreamer
All Implemented Interfaces:
SequenceStreamer
Enclosing interface:
SequenceStreamer

public static class SequenceStreamer.FileStreamer
extends Object
implements SequenceStreamer


Nested Class Summary
 
Nested classes/interfaces inherited from interface org.biojava.bio.program.ssaha.SequenceStreamer
SequenceStreamer.FileStreamer, SequenceStreamer.SequenceDBStreamer
 
Constructor Summary
SequenceStreamer.FileStreamer(SequenceFormat format, SymbolTokenization toke, File f)
           
SequenceStreamer.FileStreamer(SequenceFormat format, SymbolTokenization toke, List files)
           
 
Method Summary
 boolean hasNext()
           
 void reset()
           
 void streamNext(SeqIOListener listener)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

SequenceStreamer.FileStreamer

public SequenceStreamer.FileStreamer(SequenceFormat format,
                                     SymbolTokenization toke,
                                     List files)

SequenceStreamer.FileStreamer

public SequenceStreamer.FileStreamer(SequenceFormat format,
                                     SymbolTokenization toke,
                                     File f)
Method Detail

reset

public void reset()
Specified by:
reset in interface SequenceStreamer

hasNext

public boolean hasNext()
Specified by:
hasNext in interface SequenceStreamer

streamNext

public void streamNext(SeqIOListener listener)
                throws BioException,
                       IOException
Specified by:
streamNext in interface SequenceStreamer
Throws:
BioException
IOException