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Packages that use GappedSequence | |
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org.biojava.bio.seq | Classes and interfaces for defining biological sequences and informatics objects. |
org.biojava.bio.seq.impl | Standard in-memory implementations of Sequence and
Feature . |
Uses of GappedSequence in org.biojava.bio.seq |
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Methods in org.biojava.bio.seq that return GappedSequence | |
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static GappedSequence |
DNATools.createGappedDNASequence(String dna,
String name)
Get a new dna as a GappedSequence |
static GappedSequence |
ProteinTools.createGappedProteinSequence(String theProtein,
String name)
Get a new protein as a GappedSequence |
static GappedSequence |
SequenceTools.gappedView(Sequence seq)
Create a new gapped sequence for a sequence. |
Uses of GappedSequence in org.biojava.bio.seq.impl |
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Classes in org.biojava.bio.seq.impl that implement GappedSequence | |
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class |
SimpleGappedSequence
Simple implementation of GappedSequence. |
Constructors in org.biojava.bio.seq.impl with parameters of type GappedSequence | |
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SimpleGappedSequence(GappedSequence seq)
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