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Packages that use FramedFeature.ReadingFrame | |
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org.biojava.bio.seq | Classes and interfaces for defining biological sequences and informatics objects. |
org.biojava.bio.seq.impl | Standard in-memory implementations of Sequence and
Feature . |
Uses of FramedFeature.ReadingFrame in org.biojava.bio.seq |
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Fields in org.biojava.bio.seq declared as FramedFeature.ReadingFrame | |
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static FramedFeature.ReadingFrame |
FramedFeature.FRAME_0
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static FramedFeature.ReadingFrame |
FramedFeature.FRAME_1
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static FramedFeature.ReadingFrame |
FramedFeature.FRAME_2
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FramedFeature.ReadingFrame |
FramedFeature.Template.readingFrame
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Methods in org.biojava.bio.seq that return FramedFeature.ReadingFrame | |
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FramedFeature.ReadingFrame |
FeatureFilter.FrameFilter.getFrame()
Retrieve the reading frame this filter matches. |
FramedFeature.ReadingFrame |
FramedFeature.getReadingFrame()
return the reading frame of the feature. |
Methods in org.biojava.bio.seq with parameters of type FramedFeature.ReadingFrame | |
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static FeatureFilter |
FilterUtils.byFrame(FramedFeature.ReadingFrame frame)
Construct a filter which matches FramedFeatures with the specified reading frame. |
Constructors in org.biojava.bio.seq with parameters of type FramedFeature.ReadingFrame | |
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FeatureFilter.FrameFilter(FramedFeature.ReadingFrame frame)
Build a new filter that matches all features of a reading frame. |
Uses of FramedFeature.ReadingFrame in org.biojava.bio.seq.impl |
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Methods in org.biojava.bio.seq.impl that return FramedFeature.ReadingFrame | |
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FramedFeature.ReadingFrame |
SimpleFramedFeature.getReadingFrame()
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