|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Objectjava.lang.Throwable
java.lang.Exception
org.biojava.bio.BioException
org.biojava.bio.symbol.IllegalSymbolException
public class IllegalSymbolException
The exception to indicate that a symbol is not valid within a context.
The usual reason for throwing an IllegalSymbolException is that you are trying to add a symbol to a sequence with an alpabet that does not contain the symbol. This is the sequence/alphabet equivalent of a ClassCastException for objects.
Frequently, these excepions are actualy generated from Alphabet.validate.
Constructor Summary | |
---|---|
IllegalSymbolException(String message)
Make the exception with a message. |
|
IllegalSymbolException(Symbol sym,
String message)
Make the exception with a message and a symbol. |
|
IllegalSymbolException(Throwable cause,
String message)
|
|
IllegalSymbolException(Throwable cause,
Symbol sym,
String message)
|
Method Summary | |
---|---|
Symbol |
getSymbol()
Retrieve the symbol that caused this exception, or null. |
Methods inherited from class java.lang.Throwable |
---|
fillInStackTrace, getCause, getLocalizedMessage, getMessage, getStackTrace, initCause, printStackTrace, printStackTrace, printStackTrace, setStackTrace, toString |
Methods inherited from class java.lang.Object |
---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Constructor Detail |
---|
public IllegalSymbolException(String message)
public IllegalSymbolException(Symbol sym, String message)
public IllegalSymbolException(Throwable cause, String message)
public IllegalSymbolException(Throwable cause, Symbol sym, String message)
Method Detail |
---|
public Symbol getSymbol()
|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |