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Sequence
and
Feature
.
See:
Description
Class Summary | |
AssembledSymbolList | Support class for applications which need to patch together sections of sequence into a single SymbolList. |
FeatureImpl | Wrap up default sets of Feature implementations. |
LazyFilterFeatureHolder | FeatureHolder which lazily applies a specified filter to another FeatureHolder. |
RevCompSequence | A reverse complement view onto Sequence interface. |
SimpleFeature | A no-frills implementation of a feature. |
SimpleFramedFeature | Title: SimpleFramedFeature. |
SimpleHomologyFeature | |
SimpleRemoteFeature | A no-frills implementation of a remote feature. |
SimpleRemoteFeature.DBResolver | |
SimpleRestrictionSite | SimpleRestrictionSite represents the recognition site
of a restriction enzyme. |
SimpleSequence | A basic implementation of the Sequence interface. |
SimpleSequenceFactory | A no-frills implementation of SequenceFactory that produces SimpleSequence objects. |
SimpleSimilarityPairFeature | SimpleSimilarityPairFeature represents a similarity
between a query sequence and a subject sequence as produced by a
search program. |
SimpleStrandedFeature | A no-frills implementation of StrandedFeature. |
Standard in-memory implementations of Sequence
and
Feature
.
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