|
|||||||||||
PREV NEXT | FRAMES NO FRAMES |
Packages that use RangeLocation | |
org.biojava.bio.gui.sequence | Graphical displays of biological sequences and associated annotations. |
org.biojava.bio.seq.io.game | Event-driven parsing system for the Gene Annotation Markup Elements (GAME). |
org.biojava.bio.seq.ragbag | The Ragbag package is a set of classes for setting up a virtual sequence contig without the need for writing Biojava code. |
org.biojava.bio.symbol | Representation of the Symbols that make up a sequence, and locations within them. |
Uses of RangeLocation in org.biojava.bio.gui.sequence |
Methods in org.biojava.bio.gui.sequence that return RangeLocation | |
RangeLocation |
PairwiseRenderContext.getSecondaryRange()
getSecondaryRange returns the range of the
secondary sequence currently rendered. |
RangeLocation |
SubSequenceRenderContext.getRange()
|
RangeLocation |
SequenceRenderContext.getRange()
The range of the SymbolList to render. |
RangeLocation |
HeadlessRenderContext.getRange()
|
RangeLocation |
TranslatedSequencePanel.getRange()
getRange returns a RangeLocation
representing the region of the sequence currently being
rendered. |
RangeLocation |
SequencePanel.getRange()
|
RangeLocation |
PairwiseSequencePanel.getRange()
getRange returns a RangeLocation
representing the region of the sequence currently being
rendered. |
RangeLocation |
PairwiseSequencePanel.getSecondaryRange()
getSecondaryRange returns a
RangeLocation representing the region of the
secondary sequence currently being rendered. |
RangeLocation |
SequencePoster.getRange()
|
RangeLocation |
SubPairwiseRenderContext.getRange()
|
RangeLocation |
SubPairwiseRenderContext.getSecondaryRange()
|
Methods in org.biojava.bio.gui.sequence with parameters of type RangeLocation | |
void |
SequencePanel.setRange(RangeLocation range)
|
Constructors in org.biojava.bio.gui.sequence with parameters of type RangeLocation | |
SubSequenceRenderContext(SequenceRenderContext src,
SymbolList symbols,
FeatureHolder features,
RangeLocation range)
|
|
HeadlessRenderContext(Sequence seq,
RangeLocation range,
int width)
|
|
SubPairwiseRenderContext(PairwiseRenderContext context,
SymbolList symbols,
SymbolList secondarySymbols,
FeatureHolder features,
FeatureHolder secondaryFeatures,
RangeLocation range,
RangeLocation secondaryRange)
Creates a new SubPairwiseRenderContext . |
Uses of RangeLocation in org.biojava.bio.seq.io.game |
Methods in org.biojava.bio.seq.io.game with parameters of type RangeLocation | |
void |
GAMETranscriptCallbackItf.reportExon(RangeLocation range,
StrandedFeature.Strand strand)
Allows nesting class that manages a transcript template to gain information about its extent from nested elements that represent exons. |
void |
GAMEFeatureSetHandler.reportExon(RangeLocation range,
StrandedFeature.Strand strand)
|
Uses of RangeLocation in org.biojava.bio.seq.ragbag |
Methods in org.biojava.bio.seq.ragbag that return RangeLocation | |
RangeLocation |
RagbagMap.MapElement.getSrcLocation()
|
RangeLocation |
RagbagMap.MapElement.getDstLocation()
|
Uses of RangeLocation in org.biojava.bio.symbol |
Subclasses of RangeLocation in org.biojava.bio.symbol | |
class |
MergeLocation
Produced by LocationTools as a result of union operations. |
|
|||||||||||
PREV NEXT | FRAMES NO FRAMES |