org.biojava.bio.seq.io
Class SymbolListCharSequence

java.lang.Object
  extended byorg.biojava.bio.seq.io.SymbolListCharSequence
All Implemented Interfaces:
java.lang.CharSequence

public class SymbolListCharSequence
extends java.lang.Object
implements java.lang.CharSequence

SymbolListCharSequence is a CharSequence implementation which wraps a SymbolList. It is present primarily to support regular expression matching over SymbolLists as it avoids creating a copy.

Since:
1.3
Author:
Keith James

Constructor Summary
SymbolListCharSequence(SymbolList syms)
          Creates a new SymbolListCharSequence wrapping a SymbolList.
 
Method Summary
 char charAt(int index)
           
 int length()
           
 java.lang.CharSequence subSequence(int start, int end)
           
 java.lang.String toString()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

SymbolListCharSequence

public SymbolListCharSequence(SymbolList syms)
Creates a new SymbolListCharSequence wrapping a SymbolList.

Parameters:
syms - a SymbolList.
Method Detail

charAt

public char charAt(int index)
Specified by:
charAt in interface java.lang.CharSequence

length

public int length()
Specified by:
length in interface java.lang.CharSequence

subSequence

public java.lang.CharSequence subSequence(int start,
                                          int end)
Specified by:
subSequence in interface java.lang.CharSequence

toString

public java.lang.String toString()
Specified by:
toString in interface java.lang.CharSequence