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Packages that use AbstractChromatogram | |
org.biojava.bio.chromatogram | Interfaces and classes for chromatogram data, as produced by DNA sequencing equipment. |
org.biojava.bio.program.abi | ABI Trace Handling. |
org.biojava.bio.program.scf | Support for the SCF chromatogram format. |
Uses of AbstractChromatogram in org.biojava.bio.chromatogram |
Subclasses of AbstractChromatogram in org.biojava.bio.chromatogram | |
class |
SimpleChromatogram
A basic chromatogram implementation which provides public mutators for setting the various attributes of the chromatogram. |
Methods in org.biojava.bio.chromatogram that return AbstractChromatogram | |
protected abstract AbstractChromatogram |
AbstractChromatogram.reverseComplementInstance()
Returns a new instance of this AbstractChromatogram subclass for use in reverseComplement() . |
protected AbstractChromatogram |
SimpleChromatogram.reverseComplementInstance()
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Uses of AbstractChromatogram in org.biojava.bio.program.abi |
Subclasses of AbstractChromatogram in org.biojava.bio.program.abi | |
class |
ABIFChromatogram
An implementation of Chromatogram to
encapulsulate chromatogram data extracted from the files produced by ABI
sequencers, such as the the 377 and the 3700. |
Methods in org.biojava.bio.program.abi that return AbstractChromatogram | |
protected AbstractChromatogram |
ABIFChromatogram.reverseComplementInstance()
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Uses of AbstractChromatogram in org.biojava.bio.program.scf |
Subclasses of AbstractChromatogram in org.biojava.bio.program.scf | |
class |
SCF
A Chromatogram as loaded from an SCF
v2 or v3 file. |
Methods in org.biojava.bio.program.scf that return AbstractChromatogram | |
protected AbstractChromatogram |
SCF.reverseComplementInstance()
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