org.biojava.bio.dp
Class MarkovModel.DistributionForwarder

java.lang.Object
  extended byorg.biojava.utils.ChangeForwarder
      extended byorg.biojava.bio.dp.MarkovModel.DistributionForwarder
All Implemented Interfaces:
ChangeListener, java.util.EventListener
Enclosing class:
MarkovModel

public static class MarkovModel.DistributionForwarder
extends ChangeForwarder

Add this as a listener to each distribution in a model. It will pump the WEIGHTS and NULL_MODEL events on the distribitions over to the HMM.

Since:
1.1
Author:
Matthew Pocock

Nested Class Summary
 
Nested classes inherited from class org.biojava.utils.ChangeListener
ChangeListener.AlwaysVetoListener, ChangeListener.LoggingListener
 
Field Summary
 
Fields inherited from interface org.biojava.utils.ChangeListener
ALWAYS_VETO, LOG_TO_OUT
 
Constructor Summary
MarkovModel.DistributionForwarder(java.lang.Object source, ChangeSupport cs)
           
 
Method Summary
protected  ChangeEvent generateEvent(ChangeEvent ce)
           Return the new event to represent the originating event ce.
 
Methods inherited from class org.biojava.utils.ChangeForwarder
changeSupport, getSource, postChange, preChange
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

MarkovModel.DistributionForwarder

public MarkovModel.DistributionForwarder(java.lang.Object source,
                                         ChangeSupport cs)
Method Detail

generateEvent

protected ChangeEvent generateEvent(ChangeEvent ce)
Description copied from class: ChangeForwarder

Return the new event to represent the originating event ce.

The returned ChangeEvent is the event that will be fired, and should be built from information in the original event. If it is null, then no event will be fired.

The default implementation just constructs a ChangeEvent of the same type that chains back to ce.

Overrides:
generateEvent in class ChangeForwarder
Parameters:
ce - the originating ChangeEvent
Returns:
a new ChangeEvent to pass on, or null if no event should be sent