alignment.rb

Path: lib/bio/alignment.rb
Last Update: Sun Dec 04 02:16:41 +0000 2011

bio/alignment.rb - multiple alignment of sequences

Copyright:Copyright (C) 2003, 2005, 2006 GOTO Naohisa <ng@bioruby.org>
License:The Ruby License
 $Id: alignment.rb,v 1.24 2007/12/26 14:08:02 ngoto Exp $

About Bio::Alignment

Please refer document of Bio::Alignment module.

References

  • Bio::Align::AlignI class of the BioPerl.

doc.bioperl.org/releases/bioperl-1.4/Bio/Align/AlignI.html

  • Bio::SimpleAlign class of the BioPerl.

doc.bioperl.org/releases/bioperl-1.4/Bio/SimpleAlign.html

Required files

tempfile   bio/command   bio/sequence   bio/io/flatfile   bio/db/fasta  

[Validate]