Bio.Sequence.SeqData
Data structure
data
Sequence
t
type
Offset
type
SeqData
type
Qual
type
QualData
Accessor functions
(!)
seqlength
seqlabel
seqheader
seqdata
(?)
hasqual
seqqual
Adding information to header
appendHeader
setHeader
Converting to and from [Char]
fromStr
toStr
Sequence utilities
defragSeq
seqmap
castSeq
Nucleotide functionality
compl
revcompl
revcompl'
data
Nuc
castToNuc
Protein functionality
data
Amino
translate
fromIUPAC
toIUPAC
castToAmino
Display a nicely formated sequence.
putSeqLn
seqToStr
Default type for sequences
data
Unknown