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Packages that use SearchListener | |
org.biojava.bio.program.ssaha | SSAHA sequence searching API. |
Uses of SearchListener in org.biojava.bio.program.ssaha |
Classes in org.biojava.bio.program.ssaha that implement SearchListener | |
class |
HitMerger
A listener that merges overlapping hits and culls all hits under a given length. |
Methods in org.biojava.bio.program.ssaha with parameters of type SearchListener | |
void |
CompactedDataStore.search(java.lang.String seqID,
SymbolList symList,
SearchListener listener)
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void |
CompactedDataStore.fireHits(int word,
int offset,
SearchListener listener)
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void |
DataStore.search(java.lang.String id,
SymbolList symList,
SearchListener listener)
Search the DataStore with a symbol list. |
Constructors in org.biojava.bio.program.ssaha with parameters of type SearchListener | |
HitMerger(SearchListener delegate,
int minLength)
Build a new HitMerger that will pass events on to a delegate. |
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