Uses of Interface
org.biojava.bio.seq.ragbag.RagbagComponentDirectory

Packages that use RagbagComponentDirectory
org.biojava.bio.seq.ragbag The Ragbag package is a set of classes for setting up a virtual sequence contig without the need for writing Biojava code. 
 

Uses of RagbagComponentDirectory in org.biojava.bio.seq.ragbag
 

Classes in org.biojava.bio.seq.ragbag that implement RagbagComponentDirectory
static class RagbagComponentDirectory.EmptyComponentDirectory
          Dummy class that does nothing.
 class RagbagHashedComponentDirectory
          provides a mapping of a reference to a specific ComponentFeature It exists primarily to support the getComponent method of DASDataSource.
 

Fields in org.biojava.bio.seq.ragbag declared as RagbagComponentDirectory
static RagbagComponentDirectory RagbagComponentDirectory.UNLOGGED
           
 

Constructors in org.biojava.bio.seq.ragbag with parameters of type RagbagComponentDirectory
RagbagAssembly(java.lang.String name, java.lang.String urn, java.io.File thisDir, RagbagSequenceFactory seqFactory, RagbagComponentDirectory compDir)