Uses of Class
org.biojava.ontology.AlreadyExistsException

Packages that use AlreadyExistsException
org.biojava.ontology A general-purpose API for ontologies. 
org.biojavax.ontology Extensions to the biojava ontology model that represent BioSQL ontology. 
 

Uses of AlreadyExistsException in org.biojava.ontology
 

Methods in org.biojava.ontology that throw AlreadyExistsException
 OntologyTerm Ontology.Impl.createOntologyTerm(Ontology o)
           
 Term Ontology.createTerm(java.lang.String name, java.lang.String description)
          Create a new term in this ontology.
 Term Ontology.Impl.createTerm(java.lang.String name, java.lang.String description)
           
 Term IntegerOntology.createTerm(java.lang.String name, java.lang.String description)
           
 Term Ontology.createTerm(java.lang.String name, java.lang.String description, java.lang.Object[] synonyms)
          Create a new term in this ontology.
 Term Ontology.Impl.createTerm(java.lang.String name, java.lang.String description, java.lang.Object[] synonyms)
           
 Term IntegerOntology.createTerm(java.lang.String name, java.lang.String description, java.lang.Object[] synonyms)
           
 Triple Ontology.createTriple(Term subject, Term object, Term predicate, java.lang.String name, java.lang.String description)
          Creates a new Triple.
 Triple Ontology.Impl.createTriple(Term subject, Term object, Term predicate, java.lang.String name, java.lang.String description)
           
 Triple IntegerOntology.createTriple(Term subject, Term object, Term predicate, java.lang.String name, java.lang.String description)
           
 Variable Ontology.createVariable(java.lang.String name, java.lang.String description)
          Create a new term in this ontology that is used as a variable.
 Variable Ontology.Impl.createVariable(java.lang.String name, java.lang.String description)
           
 Variable IntegerOntology.createVariable(java.lang.String name, java.lang.String description)
           
 

Uses of AlreadyExistsException in org.biojavax.ontology
 

Methods in org.biojavax.ontology that throw AlreadyExistsException
 void ComparableTriple.addDescriptor(ComparableTerm desc)
          Adds a descriptor.
 Term SimpleComparableOntology.createTerm(java.lang.String name, java.lang.String description)
          Create a new term in this ontology.
 Term SimpleComparableOntology.createTerm(java.lang.String name, java.lang.String description, java.lang.Object[] synonyms)
          Create a new term in this ontology.
 Triple SimpleComparableOntology.createTriple(Term subject, Term object, Term predicate, java.lang.String name, java.lang.String description)
          Creates a new Triple. If you call this method with plain Terms instead of ComparableTerms, it will import them into the local ontology first.
 Variable SimpleComparableOntology.createVariable(java.lang.String name, java.lang.String description)
          Create a new term in this ontology that is used as a variable. NOT IMPLEMENTED