org.biojavax.bio.seq.io
Class UniProtFormat.Terms

java.lang.Object
  extended by org.biojavax.bio.seq.RichSequence.Terms
      extended by org.biojavax.bio.seq.io.UniProtFormat.Terms
Enclosing class:
UniProtFormat

public static class UniProtFormat.Terms
extends RichSequence.Terms

Implements some UniProt-specific terms.


Field Summary
 
Fields inherited from class org.biojavax.bio.seq.RichSequence.Terms
DOI_KEY, MEDLINE_KEY, PLASMID_KEY, PUBMED_KEY, SPECIES_KEY, STRAIN_KEY, TISSUE_KEY, TRANSPOSON_KEY
 
Constructor Summary
UniProtFormat.Terms()
           
 
Method Summary
static ComparableTerm getUniProtDBNameTerm()
          Getter for the UniProt combined database term
static ComparableTerm getUniProtTerm()
          Getter for the UniProt term
 
Methods inherited from class org.biojavax.bio.seq.RichSequence.Terms
getAdditionalAccessionTerm, getCopyrightTerm, getDataClassTerm, getDateAnnotatedTerm, getDateCreatedTerm, getDateUpdatedTerm, getFeatureDescTerm, getFTIdTerm, getGeneNameTerm, getGeneSynonymTerm, getKeywordTerm, getMolTypeTerm, getOrderedLocusNameTerm, getORFNameTerm, getOrganelleTerm, getPlasmidTerm, getRelAnnotatedTerm, getRelCreatedTerm, getRelUpdatedTerm, getSpeciesTerm, getStrainTerm, getStrandedTerm, getTissueTerm, getTransposonTerm
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

UniProtFormat.Terms

public UniProtFormat.Terms()
Method Detail

getUniProtTerm

public static ComparableTerm getUniProtTerm()
Getter for the UniProt term

Returns:
The UniProt Term

getUniProtDBNameTerm

public static ComparableTerm getUniProtDBNameTerm()
Getter for the UniProt combined database term

Returns:
The combined database for UniProt Term